ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4yduA1 - ECOD Domain | ECOD

ECOD/Domains/e4yduA1

e4yduA1

UID: 001507872

PDB

Range: A:1-111
PDB: 4YDU chain A(all domains)
UniProt: P05852 (all domains)
Gene: tsaD

Molecule: tRNA N6-adenosine threonylcarbamoyltransferase

3D Structure

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Related Domains

Browse other domains in TsaD →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyTsaD(2484.1.1.10)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
FE (III) IONFE
metal
Magnesium ion

Pfam Families

tRNA N6-adenosine threonylcarbamoyltransferase

ClanCL0108Actin_ATPase

External Links

ECOD PDB View: 4YDU RCSB PDB: 4YDU PDBe: 4YDU UniProt: P05852

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.