ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4yduD1 - ECOD Domain | ECOD

ECOD/Domains/e4yduD1

e4yduD1

UID: 001507874

PDB

Range: D:1-107
PDB: 4YDU chain D(all domains)
UniProt: P76256 (all domains)
Gene: tsaB

Molecule: tRNA threonylcarbamoyladenosine biosynthesis protein TsaB

3D Structure

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Related Domains

Browse other domains in TsaD →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyTsaD(2484.1.1.10)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer.

Pfam Families

tRNA N6-adenosine threonylcarbamoyltransferase

ClanCL0108Actin_ATPase

External Links

ECOD PDB View: 4YDU RCSB PDB: 4YDU PDBe: 4YDU UniProt: P76256

Downloads

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Drug annotations from DrugDomain.