ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4yeoA1 - ECOD Domain | ECOD

ECOD/Domains/e4yeoA1

e4yeoA1

UID: 001507881

PDB

Range: A:1-129
PDB: 4YEO chain A(all domains)
UniProt: P00698 (all domains)
Gene: LYZ

Molecule: Lysozyme C

3D Structure

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Related Domains

Browse other domains in Lys →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupLysozyme-like(235)

HH-groupLysozyme-like(235.1)

TT-groupLysozyme-like(235.1.1)

FFamilyLys(235.1.1.1)

Ligands

in contact, ≤ 4 Å

CisplatinCPT
drugDrugBank DB00515
PLATINUM (II) IONPT
metal

+ 4 additives (Acetate, Dimethyl sulfoxide, Nitrate, …)

Pfam Families

C-type lysozyme/alpha-lactalbumin family

ClanCL0037Lysozyme

External Links

ECOD PDB View: 4YEO RCSB PDB: 4YEO PDBe: 4YEO UniProt: P00698

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

AcetateACT

DrugBank DB14511

Dimethyl sulfoxideDMS

DrugBank DB01093

NitrateNO3

DrugBank DB14049

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.