ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rkdB1 - ECOD Domain | ECOD

ECOD/Domains/e4rkdB1

e4rkdB1

UID: 001508092

PDB

Range: B:1-313
PDB: 4RKD chain B(all domains)
UniProt: C7E5X4 (all domains)

Molecule: Aromatic amino acid aminotransferase

3D Structure

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Related Domains

Browse other domains in Aminotran_1_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyAminotran_1_2(7577.1.1.1)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114
2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYLENE)-AMINO]-SUCCINIC ACIDKET
Magnesium ionMG

Pfam Families

PF00155Aminotran_1_2

Aminotransferase class I and II

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 4RKD RCSB PDB: 4RKD PDBe: 4RKD UniProt: C7E5X4

Downloads

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metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.