ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4yfyB1 - ECOD Domain | ECOD

ECOD/Domains/e4yfyB1

e4yfyB1

UID: 001508485

PDB

Range: B:1-187
PDB: 4YFY chain B(all domains)
UniProt: M9P0Q2 (all domains)
Gene: vioF

Molecule: VioF

3D Structure

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Related Domains

Browse other domains in Formyl_trans_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFormyltransferase(7571)

HH-groupFormyltransferase(7571.1)

TT-groupFormyltransferase(7571.1.1)

FFamilyFormyl_trans_N(7571.1.1.1)

Ligands

in contact, ≤ 4 Å

dTDP-4-amino-4,6-dideoxyglucose0FX
N-[4-({[(6R)-2-amino-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid1YJ

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00551Formyl_trans_N

Formyl transferase

External Links

ECOD PDB View: 4YFY RCSB PDB: 4YFY PDBe: 4YFY UniProt: M9P0Q2

Downloads

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