ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4b67A2 - ECOD Domain | ECOD

ECOD/Domains/e4b67A2

e4b67A2

UID: 001508721

PDB

Range: A:216-406
PDB: 4B67 chain A(all domains)
UniProt: E9QYP0 (all domains)
Gene: sidA

Molecule: L-ORNITHINE N5 MONOOXYGENASE

3D Structure

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Related Domains

Browse other domains in Lys_Orn_oxgnase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyLys_Orn_oxgnase(2003.1.2.28)

Ligands

in contact, ≤ 4 Å

Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461
OrnithineORN
drugDrugBank DB00129

Pfam Families

PF13434Lys_Orn_oxgnase

L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4B67 RCSB PDB: 4B67 PDBe: 4B67 UniProt: E9QYP0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.