ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1d9zA2 - ECOD Domain | ECOD

ECOD/Domains/e1d9zA2

e1d9zA2

UID: 001508988

PDB

Range: A:2-155,A:243-414
PDB: 1D9Z chain A(all domains)
UniProt: P56981 (all domains)
Gene: uvrB

Molecule: EXCINUCLEASE UVRABC COMPONENT UVRB

3D Structure

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Related Domains

Browse other domains in ResIII, UvrB_3rd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyResIII, UvrB_3rd(2004.1.1.489)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Magnesium ionMG
metal
Zinc ionZN

Pfam Families

Type III restriction enzyme, res subunit

ClanCL0023P-loop_NTPase

PF27431UvrB_3rd

UvrB third helical domain

External Links

ECOD PDB View: 1D9Z RCSB PDB: 1D9Z PDBe: 1D9Z UniProt: P56981

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.