ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ef0B1 - ECOD Domain | ECOD

ECOD/Domains/e1ef0B1

e1ef0B1

UID: 001509126

PDB

Range: B:697-182,B:410-458
PDB: 1EF0 chain B(all domains)
UniProt: P17255 (all domains)
Gene: VMA1

Molecule: PI-SCEI ENDONUCLEASE

3D Structure

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Related Domains

Browse other domains in Hom_end_hint →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupHedgehog/intein(69)

HH-groupHedgehog/intein(69.1)

TT-groupHint(69.1.1)

FFamilyHom_end_hint(69.1.1.2)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05203Hom_end_hint

Hom_end-associated Hint

ClanCL0363H-int

External Links

ECOD PDB View: 1EF0 RCSB PDB: 1EF0 PDBe: 1EF0 UniProt: P17255

Downloads

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