ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jk2D4 - ECOD Domain | ECOD

ECOD/Domains/e4jk2D4

e4jk2D4

UID: 001509943

PDB

Range: D:334-377,D:418-498
PDB: 4JK2 chain D(all domains)
UniProt: P0A8T7 (all domains)
Gene: rpoC

Molecule: Escherichia coli RNA polymerase beta' subunit

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb1_2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupdouble psi(1.1.2)

FFamilyRNA_pol_Rpb1_2(1.1.2.2)

Ligands

in contact, ≤ 4 Å

guanosine 5'-(tetrahydrogen triphosphate) 3'-(trihydrogen diphosphate)0O2

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00623RNA_pol_Rpb1_2

RNA polymerase Rpb1, domain 2

External Links

ECOD PDB View: 4JK2 RCSB PDB: 4JK2 PDBe: 4JK2 UniProt: P0A8T7

Downloads

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