ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jk2I1 - ECOD Domain | ECOD

ECOD/Domains/e4jk2I1

e4jk2I1

UID: 001509949

PDB

Range: I:895-931,I:1135-1151,I:1216-1376
PDB: 4JK2 chain I(all domains)
UniProt: P0A8T7 (all domains)
Gene: rpoC

Molecule: Escherichia coli RNA polymerase beta' subunit

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb1_5 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupcentral helical domain in RNA-polymerase beta-prime subunit(4954)

HH-groupcentral helical domain in RNA-polymerase beta-prime subunit(4954.1)

TT-groupcentral helical domain in RNA-polymerase beta-prime subunit(4954.1.1)

FFamilyRNA_pol_Rpb1_5(4954.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04998RNA_pol_Rpb1_5

RNA polymerase Rpb1, domain 5

External Links

ECOD PDB View: 4JK2 RCSB PDB: 4JK2 PDBe: 4JK2 UniProt: P0A8T7

Downloads

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