ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4kmiA1 - ECOD Domain | ECOD

ECOD/Domains/e4kmiA1

e4kmiA1

UID: 001510062

PDB

Range: A:2-390
PDB: 4KMI chain A(all domains)
UniProt: Q5LH68 (all domains)
Gene: BF0772

Molecule: 4-O-beta-D-mannosyl-D-glucose phosphorylase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_130 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group5-bladed(5.1.2)

FFamilyGlyco_hydro_130(5.1.2.7)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives ((4r)-2-Methylpentane-2,4-Diol, Phosphate ion)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564
Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer.

Pfam Families

PF04041Glyco_hydro_130

beta-1,4-mannooligosaccharide phosphorylase

ClanCL0143B_Fructosidase

External Links

ECOD PDB View: 4KMI RCSB PDB: 4KMI PDBe: 4KMI UniProt: Q5LH68

Downloads

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Drug annotations from DrugDomain.