ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3vr8C1 - ECOD Domain | ECOD

ECOD/Domains/e3vr8C1

e3vr8C1

UID: 000151188

RepresentativePDB

Range: C:34-186
PDB: 3VR8 chain C(all domains)
UniProt: P92506 (all domains)
Gene: SDHC

Molecule: Cytochrome b-large subunit

3D Structure

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Related Domains

Browse other domains in Sdh_cyt →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTransmembrane heme-binding four-helical bundle(5069)

HH-groupTransmembrane heme-binding four-helical bundle(5069.1)

TT-groupFumarate reductase respiratory complex transmembrane subunits(5069.1.3)

FFamilySdh_cyt(5069.1.3.1)

Ligands

in contact, ≤ 4 Å

L-Alpha-Phosphatidyl-Beta-Oleoyl-Gamma-Palmitoyl-PhosphatidylethanolamineEPH
drugDrugBank DB03047
FerrohemeHEM
drugDrugBank DB18267

Pfam Families

PF01127Sdh_cyt

Succinate dehydrogenase/Fumarate reductase transmembrane subunit

ClanCL0335FumRed-TM

External Links

ECOD PDB View: 3VR8 RCSB PDB: 3VR8 PDBe: 3VR8 UniProt: P92506

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

2-amino-3-methoxy-6-methyl-5-[(2E)-3-methylhex-2-en-1-yl]cyclohexa-2,5-diene-1,4-dioneRQX

Shown in the structure viewer. Drug annotations from DrugDomain.