ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3zscA1 - ECOD Domain | ECOD

ECOD/Domains/e3zscA1

e3zscA1

UID: 000151191

PDB

Range: A:4-332
PDB: 3ZSC chain A(all domains)
UniProt: Q9WYR4 (all domains)
Gene: pelA

Molecule: PECTATE TRISACCHARIDE-LYASE

3D Structure

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Related Domains

Browse other domains in Pectate_lyase_4 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPectin lyase-like(207.2)

TT-groupPectin lyase-like(207.2.1)

FFamilyPectate_lyase_4(207.2.1.3)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Phosphate ion)

GlycerinGOL
DrugBank DB09462
Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00544Pectate_lyase_4

Pectate lyase

ClanCL0268Pec_lyase-like

External Links

ECOD PDB View: 3ZSC RCSB PDB: 3ZSC PDBe: 3ZSC UniProt: Q9WYR4

Downloads

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