ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4p2bA3 - ECOD Domain | ECOD

ECOD/Domains/e4p2bA3

e4p2bA3

UID: 001513037

PDB

Range: A:468-575
PDB: 4P2B chain A(all domains)
UniProt: D3XAP9 (all domains)

Molecule: Glutamine aminoacyl-tRNA synthetase

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1c_C2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupRibosomal protein L25-like(239)

HH-groupRibosomal protein L25-like(239.1)

TT-groupRibosomal protein L25-like(239.1.1)

FFamilytRNA-synt_1c_C2(239.1.1.6)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF20974tRNA-synt_1c_C2

tRNA synthetases class I (E and Q), anti-codon binding domain

ClanCL0733Ribosomal_L25

External Links

ECOD PDB View: 4P2B RCSB PDB: 4P2B PDBe: 4P2B UniProt: D3XAP9

Downloads

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