ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4xm5A2 - ECOD Domain | ECOD

ECOD/Domains/e4xm5A2

e4xm5A2

UID: 001514686

RepresentativePDB

Range: A:215-303
PDB: 4XM5 chain A(all domains)
UniProt: Q6FML9 (all domains)
Gene: SLX1

Molecule: Structure-specific endonuclease subunit SLX1

3D Structure

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Related Domains

Browse other domains in SLX1_C →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilySLX1_C(376.1.1.37)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Structure-specific endonuclease subunit SLX1, C-terminal

ClanCL0229RING

External Links

ECOD PDB View: 4XM5 RCSB PDB: 4XM5 PDBe: 4XM5 UniProt: Q6FML9

Downloads

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