ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4yu8A1 - ECOD Domain | ECOD

ECOD/Domains/e4yu8A1

e4yu8A1

UID: 001514721

PDB

Range: A:33-64,A:84-123
PDB: 4YU8 chain A(all domains)
UniProt: P41271 (all domains)
Gene: NBL1

Molecule: Neuroblastoma suppressor of tumorigenicity 1

3D Structure

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Related Domains

Browse other domains in DAN →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupCystine-knot cytokines(385)

HH-groupCystine-knot cytokines(385.1)

TT-groupCystine-knot cytokines(385.1.1)

FFamilyDAN(385.1.1.8)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

DAN domain

ClanCL0079Cystine-knot

External Links

ECOD PDB View: 4YU8 RCSB PDB: 4YU8 PDBe: 4YU8 UniProt: P41271

Downloads

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Drug annotations from DrugDomain.