ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1qanA2 - ECOD Domain | ECOD

ECOD/Domains/e1qanA2

e1qanA2

UID: 001515128

PDB

Range: A:9-181
PDB: 1QAN chain A(all domains)
UniProt: P13956 (all domains)
Gene: ermC'

Molecule: ERMC' METHYLTRANSFERASE

3D Structure

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Related Domains

Browse other domains in RrnaAD, Methyltransf_11 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyRrnaAD, Methyltransf_11(2003.1.5.182)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer.

Pfam Families

Ribosomal RNA adenine dimethylase

ClanCL0063NADP_Rossmann

PF08241Methyltransf_11

Methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1QAN RCSB PDB: 1QAN PDBe: 1QAN UniProt: P13956

Downloads

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Drug annotations from DrugDomain.