ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ww5A1 - ECOD Domain | ECOD

ECOD/Domains/e4ww5A1

e4ww5A1

UID: 001515375

PDB

Range: A:5-257
PDB: 4WW5 chain A(all domains)
UniProt: P53323 (all domains)
Gene: BUD32

Molecule: EKC/KEOPS complex subunit BUD32

3D Structure

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Related Domains

Browse other domains in Kdo →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyKdo(206.1.1.17)

Ligands

in contact, ≤ 4 Å

Phosphoaminophosphonic acid-adenylate esterANP

+ 3 additives (Acetate, Glycerin, Sulfate ion)

AcetateACT
DrugBank DB14511
GlycerinGOL

Pfam Families

Lipopolysaccharide kinase (Kdo/WaaP) family

ClanCL0016PKinase

External Links

ECOD PDB View: 4WW5 RCSB PDB: 4WW5 PDBe: 4WW5 UniProt: P53323

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.