ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5agdB1 - ECOD Domain | ECOD

ECOD/Domains/e5agdB1

e5agdB1

UID: 001515420

PDB

Range: B:35-374
PDB: 5AGD chain B(all domains)
UniProt: Q9Z4P9 (all domains)
Gene: aman6

Molecule: ALPHA-1,6-MANNANASE

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_76 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyGlyco_hydro_76(109.2.1.13)

Ligands

in contact, ≤ 4 Å

alpha-D-mannopyranoseMAN
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03663Glyco_hydro_76

Glycosyl hydrolase family 76

ClanCL00596_Hairpin

External Links

ECOD PDB View: 5AGD RCSB PDB: 5AGD PDBe: 5AGD UniProt: Q9Z4P9

Downloads

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