ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4p8jA1 - ECOD Domain | ECOD

ECOD/Domains/e4p8jA1

e4p8jA1

UID: 001515476

PDB

Range: A:4-217
PDB: 4P8J chain A(all domains)
UniProt: Q9KKP2 (all domains)
Gene: ribB

Molecule: 3,4-dihydroxy-2-butanone 4-phosphate synthase

3D Structure

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Related Domains

Browse other domains in DHBP_synthase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupYrdC/RibB(297)

HH-groupYrdC/RibB(297.1)

TT-groupYrdC/RibB(297.1.1)

FFamilyDHBP_synthase(297.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00926DHBP_synthase

3,4-dihydroxy-2-butanone 4-phosphate synthase

External Links

ECOD PDB View: 4P8J RCSB PDB: 4P8J PDBe: 4P8J UniProt: Q9KKP2

Downloads

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