ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4s23B2 - ECOD Domain | ECOD

ECOD/Domains/e4s23B2

e4s23B2

UID: 001515520

PDB

Range: B:292-406
PDB: 4S23 chain B(all domains)
UniProt: Q84GJ3 (all domains)
Gene: ispG

Molecule: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase

3D Structure

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Related Domains

Browse other domains in GcpE_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupSulfite reductase hemoprotein (SiRHP), domains 2 and 4(296)

HH-groupSulfite reductase hemoprotein (SiRHP), domains 2 and 4(296.1)

TT-groupSulfite reductase hemoprotein (SiRHP), domains 2 and 4(296.1.1)

FFamilyGcpE_C(296.1.1.3)

Ligands

in contact, ≤ 4 Å

(2E)-4-hydroxy-3-methylbut-2-en-1-yl trihydrogen diphosphateH6P
Iron/sulfur clusterSF4

+ 1 additive (2-(N-morpholino)ethanesulfonic acid)

2-(N-morpholino)ethanesulfonic acidMES

Pfam Families

GcpE protein C-terminal domain

External Links

ECOD PDB View: 4S23 RCSB PDB: 4S23 PDBe: 4S23 UniProt: Q84GJ3

Downloads

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DrugBank DB03814

Shown in the structure viewer. Drug annotations from DrugDomain.