ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4tn4A1 - ECOD Domain | ECOD

ECOD/Domains/e4tn4A1

e4tn4A1

UID: 001515527

PDB

Range: A:289-442
PDB: 4TN4 chain A(all domains)
UniProt: A5K8L9 (all domains)
Gene: PVX_100730

Molecule: Serine hydroxymethyltransferase

3D Structure

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Related Domains

Browse other domains in SHMT →

Classification

AArchitecturea+b two layers(a.11)

XX-groupC-terminal domain in some PLP-dependent transferases(3016)

HH-groupC-terminal domain in some PLP-dependent transferases(3016.1)

TT-groupC-terminal domain in some PLP-dependent transferases(3016.1.1)

FFamilySHMT(3016.1.1.5)

Ligands

in contact, ≤ 4 Å

MercaptoethanolBME
drugDrugBank DB03345
N-Pyridoxyl-Glycine-5-MonophosphatePLG
drugDrugBank DB02824

Pfam Families

Serine hydroxymethyltransferase

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 4TN4 RCSB PDB: 4TN4 PDBe: 4TN4 UniProt: A5K8L9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(4S)-6-amino-4-(5-cyano-3'-fluorobiphenyl-3-yl)-4-cyclobutyl-3-methyl-2,4-dihydropyrano[2,3-c]pyrazole-5-carbonitrile33G

Shown in the structure viewer. Drug annotations from DrugDomain.