ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ej5A1 - ECOD Domain | ECOD

ECOD/Domains/e4ej5A1

e4ej5A1

UID: 000151842

PDB

Range: A:1-425
PDB: 4EJ5 chain A(all domains)
UniProt: P10845 (all domains)

Molecule: Botulinum neurotoxin A light chain

3D Structure

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Related Domains

Browse other domains in Peptidase_M27 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M27(2498.1.1.15)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 5 additives (Carbonate ion, Glycerin, Imidazole, …)

Carbonate ionCO3
DrugBank DB14531
Glycerin

Pfam Families

PF01742Peptidase_M27

Clostridial neurotoxin zinc protease

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 4EJ5 RCSB PDB: 4EJ5 PDBe: 4EJ5 UniProt: P10845

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

ImidazoleIMD

DrugBank DB03366

Sulfate ionSO4

DrugBank DB14546

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.