ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1us5A3 - ECOD Domain | ECOD

ECOD/Domains/e1us5A3

e1us5A3

UID: 001518775

RepresentativePDB

Range: A:17-110,A:247-314
PDB: 1US5 chain A(all domains)
UniProt: P83817 (all domains)

Molecule: PUTATIVE GLUR0 LIGAND BINDING CORE

3D Structure

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Related Domains

Browse other domains in NMT1_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyNMT1_3(7523.1.1.32)

Ligands

in contact, ≤ 4 Å

Glutamic acidGLU
drugDrugBank DB00142

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO
within 5 Å only

Shown in the structure viewer.

Pfam Families

NMT1-like family

ClanCL0177PBP

External Links

ECOD PDB View: 1US5 RCSB PDB: 1US5 PDBe: 1US5 UniProt: P83817

Downloads

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Drug annotations from DrugDomain.