ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1xs5A3 - ECOD Domain | ECOD

ECOD/Domains/e1xs5A3

e1xs5A3

UID: 001518783

RepresentativePDB

Range: A:87-200
PDB: 1XS5 chain A(all domains)
UniProt: O07950 (all domains)
Gene: tpn32

Molecule: Membrane lipoprotein TpN32

3D Structure

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Related Domains

Browse other domains in Lipoprotein_9 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyLipoprotein_9(7523.1.1.13)

Ligands

in contact, ≤ 4 Å

MethionineMET
drugDrugBank DB00134

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03180Lipoprotein_9

NlpA lipoprotein

ClanCL0177PBP

External Links

ECOD PDB View: 1XS5 RCSB PDB: 1XS5 PDBe: 1XS5 UniProt: O07950

Downloads

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