ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4onyA1 - ECOD Domain | ECOD

ECOD/Domains/e4onyA1

e4onyA1

UID: 001518864

RepresentativePDB

Range: A:12-85,A:191-304,A:565-594
PDB: 4ONY chain A(all domains)
UniProt: C0RL96 (all domains)
Gene: BMEA_B0549

Molecule: Extracellular solute-binding protein family 5

3D Structure

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Related Domains

Browse other domains in SBP_bac_5 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_5(7523.1.1.3)

Ligands

in contact, ≤ 4 Å

Diethylene glycol diethyl etherP4G
drugDrugBank DB08357

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF00496SBP_bac_5

Bacterial extracellular solute-binding proteins, family 5 Middle

ClanCL0177PBP

External Links

ECOD PDB View: 4ONY RCSB PDB: 4ONY PDBe: 4ONY UniProt: C0RL96

Downloads

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Drug annotations from DrugDomain.