ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4s1kA1 - ECOD Domain | ECOD

ECOD/Domains/e4s1kA1

e4s1kA1

UID: 001518876

RepresentativePDB

Range: A:2-237
PDB: 4S1K chain A(all domains)
UniProt: Q5EK29 (all domains)

Molecule: Polyhedrin

3D Structure

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Related Domains

Browse other domains in CPV_Polyhedrin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupPolyhedrin(10.27)

TT-groupPolyhedrin(10.27.1)

FFamilyCPV_Polyhedrin(10.27.1.2)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF17515CPV_Polyhedrin

Cypovirus polyhedrin

External Links

ECOD PDB View: 4S1K RCSB PDB: 4S1K PDBe: 4S1K UniProt: Q5EK29

Downloads

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