ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4lq1C1 - ECOD Domain | ECOD

ECOD/Domains/e4lq1C1

e4lq1C1

UID: 001518991

PDB

Range: C:227-622
PDB: 4LQ1 chain C(all domains)
UniProt: P07762 (all domains)
Gene: glgB

Molecule: 1,4-alpha-glucan branching enzyme GlgB

3D Structure

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Related Domains

Browse other domains in Alpha-amylase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAlpha-amylase(2002.1.1.4)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00128Alpha-amylase

Alpha amylase, catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4LQ1 RCSB PDB: 4LQ1 PDBe: 4LQ1 UniProt: P07762

Downloads

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