ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qf5A1 - ECOD Domain | ECOD

ECOD/Domains/e4qf5A1

e4qf5A1

UID: 001519095

PDB

Range: A:113-322
PDB: 4QF5 chain A(all domains)
UniProt: B7GVN5 (all domains)

Molecule: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase

3D Structure

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Related Domains

Browse other domains in Mur_ligase_M →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyMur_ligase_M(2004.1.1.159)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08245Mur_ligase_M

Mur ligase middle domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 4QF5 RCSB PDB: 4QF5 PDBe: 4QF5 UniProt: B7GVN5

Downloads

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