ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qf5A3 - ECOD Domain | ECOD

ECOD/Domains/e4qf5A3

e4qf5A3

UID: 001519097

PDB

Range: A:323-465
PDB: 4QF5 chain A(all domains)
UniProt: B7GVN5 (all domains)

Molecule: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase

3D Structure

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Related Domains

Browse other domains in Mur_ligase_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMurD-like peptide ligases, peptide-binding domain(7570)

HH-groupMurD-like peptide ligases, peptide-binding domain(7570.1)

TT-groupMurD-like peptide ligases, peptide-binding domain(7570.1.1)

FFamilyMur_ligase_C(7570.1.1.1)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02875Mur_ligase_C

Mur ligase, glutamate ligase domain

ClanCL0794Mur_ligase_C_sf

External Links

ECOD PDB View: 4QF5 RCSB PDB: 4QF5 PDBe: 4QF5 UniProt: B7GVN5

Downloads

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