ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4yeeC1 - ECOD Domain | ECOD

ECOD/Domains/e4yeeC1

e4yeeC1

UID: 001519340

PDB

Range: C:75-156
PDB: 4YEE chain C(all domains)
UniProt: Q9QZH4 (all domains)
Gene: Prkab2

Molecule: 5'-AMP-activated protein kinase subunit beta-2

3D Structure

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Related Domains

Browse other domains in AMPK1_CBM →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyAMPK1_CBM(11.1.1.207)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF16561AMPK1_CBM

Glycogen recognition site of AMP-activated protein kinase

ClanCL0369GHD

External Links

ECOD PDB View: 4YEE RCSB PDB: 4YEE PDBe: 4YEE UniProt: Q9QZH4

Downloads

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