ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4dz1A2 - ECOD Domain | ECOD

ECOD/Domains/e4dz1A2

e4dz1A2

UID: 001520106

PDB

Range: A:25-114,A:190-253
PDB: 4DZ1 chain A(all domains)
UniProt: G9W5C4 (all domains)

Molecule: DalS D-Alanine transporter

3D Structure

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Related Domains

Browse other domains in SBP_bac_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_3(7523.1.1.4)

Ligands

in contact, ≤ 4 Å

D-AlanineDAL
drugDrugBank DB01786

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00497SBP_bac_3

Bacterial extracellular solute-binding proteins, family 3

ClanCL0177PBP

External Links

ECOD PDB View: 4DZ1 RCSB PDB: 4DZ1 PDBe: 4DZ1 UniProt: G9W5C4

Downloads

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