ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ef1A2 - ECOD Domain | ECOD

ECOD/Domains/e4ef1A2

e4ef1A2

UID: 001520170

PDB

Range: A:28-109,A:228-272
PDB: 4EF1 chain A(all domains)
UniProt: Q831K8 (all domains)
Gene: EF_2496

Molecule: Pheromone cOB1/lipoprotein, YaeC family

3D Structure

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Related Domains

Browse other domains in Lipoprotein_9 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyLipoprotein_9(7523.1.1.13)

Ligands

in contact, ≤ 4 Å

SelenomethionineMSE
drugDrugBank DB11142

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03180Lipoprotein_9

NlpA lipoprotein

ClanCL0177PBP

External Links

ECOD PDB View: 4EF1 RCSB PDB: 4EF1 PDBe: 4EF1 UniProt: Q831K8

Downloads

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