ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4elqB1 - ECOD Domain | ECOD

ECOD/Domains/e4elqB1

e4elqB1

UID: 001520225

PDB

Range: B:21-119,B:247-330
PDB: 4ELQ chain B(all domains)
UniProt: Q5SHV2 (all domains)
Gene: TTHA1628

Molecule: Iron ABC transporter, periplasmic iron-binding protein

3D Structure

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Related Domains

Browse other domains in SBP_bac_11 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_11(7523.1.1.30)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Carbonate ion)

Carbonate ionCO3
DrugBank DB14531

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13531SBP_bac_11

Bacterial extracellular solute-binding protein

ClanCL0177PBP

External Links

ECOD PDB View: 4ELQ RCSB PDB: 4ELQ PDBe: 4ELQ UniProt: Q5SHV2

Downloads

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