ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4euoA1 - ECOD Domain | ECOD

ECOD/Domains/e4euoA1

e4euoA1

UID: 001520277

PDB

Range: A:123-246
PDB: 4EUO chain A(all domains)
UniProt: A9CGA5 (all domains)
Gene: Atu4243

Molecule: ABC transporter, substrate binding protein (Polyamine)

3D Structure

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Related Domains

Browse other domains in SBP_bac_8 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_8(7523.1.1.28)

Ligands

in contact, ≤ 4 Å

gamma-Aminobutyric acidABU
drugDrugBank DB02530

+ 2 additives (Sulfate ion, Glycerol)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

PF13416SBP_bac_8

Bacterial extracellular solute-binding protein

ClanCL0177PBP

External Links

ECOD PDB View: 4EUO RCSB PDB: 4EUO PDBe: 4EUO UniProt: A9CGA5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.