ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4io5A2 - ECOD Domain | ECOD

ECOD/Domains/e4io5A2

e4io5A2

UID: 001521102

PDB

Range: A:1-104,A:206-248
PDB: 4IO5 chain A(all domains)
UniProt: E9P5T5 (all domains)

Molecule: AvGluR1 ligand binding domain

3D Structure

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Related Domains

Browse other domains in SBP_bac_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_3(7523.1.1.4)

Ligands

in contact, ≤ 4 Å

AlanineALA
drugDrugBank DB00160
Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00497SBP_bac_3

Bacterial extracellular solute-binding proteins, family 3

ClanCL0177PBP

External Links

ECOD PDB View: 4IO5 RCSB PDB: 4IO5 PDBe: 4IO5 UniProt: E9P5T5

Downloads

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