ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1jnfA4 - ECOD Domain | ECOD

ECOD/Domains/e1jnfA4

e1jnfA4

UID: 001521196

PDB

Range: A:3-96,A:248-331
PDB: 1JNF chain A(all domains)
UniProt: P19134 (all domains)
Gene: TF

Molecule: serotransferrin

3D Structure

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Related Domains

Browse other domains in Transferrin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyTransferrin(7523.1.1.2)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
FE (III) IONFE
metal

+ 1 additive (Carbonate ion)

Carbonate ionCO3

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00405Transferrin

Transferrin

ClanCL0177PBP

External Links

ECOD PDB View: 1JNF RCSB PDB: 1JNF PDBe: 1JNF UniProt: P19134

Downloads

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