ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jwyA1 - ECOD Domain | ECOD

ECOD/Domains/e4jwyA1

e4jwyA1

UID: 001521212

PDB

Range: A:5-133,A:244-285
PDB: 4JWY chain A(all domains)
UniProt: Q62645 (all domains)
Gene: Grin2d

Molecule: Glutamate receptor ionotropic, NMDA 2D

3D Structure

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Related Domains

Browse other domains in Lig_chan-Glu_bd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyLig_chan-Glu_bd(7523.1.1.20)

Ligands

in contact, ≤ 4 Å

(2R)-amino(1-hydroxy-4-propyl-1H-pyrazol-5-yl)ethanoic acid1N4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF10613Lig_chan-Glu_bd

Ligated ion channel L-glutamate- and glycine-binding site

ClanCL0177PBP

External Links

ECOD PDB View: 4JWY RCSB PDB: 4JWY PDBe: 4JWY UniProt: Q62645

Downloads

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