ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4kd5B2 - ECOD Domain | ECOD

ECOD/Domains/e4kd5B2

e4kd5B2

UID: 001521285

PDB

Range: B:124-229
PDB: 4KD5 chain B(all domains)
UniProt: Q18A64 (all domains)
Gene: modA

Molecule: ABC-type transport system, molybdenum-specific extracellular solute-binding protein

3D Structure

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Related Domains

Browse other domains in SBP_bac_11 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_11(7523.1.1.30)

Ligands

in contact, ≤ 4 Å

2-ButanolSBT
drugDrugBank DB02606within 5 Å only

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF13531SBP_bac_11

Bacterial extracellular solute-binding protein

ClanCL0177PBP

External Links

ECOD PDB View: 4KD5 RCSB PDB: 4KD5 PDBe: 4KD5 UniProt: Q18A64

Downloads

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Drug annotations from DrugDomain.