ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4kr5B1 - ECOD Domain | ECOD

ECOD/Domains/e4kr5B1

e4kr5B1

UID: 001521345

PDB

Range: B:346-441
PDB: 4KR5 chain B(all domains)
UniProt: Q9CES5 (all domains)
Gene: glnP

Molecule: Glutamine ABC transporter permease and substrate binding protein protein

3D Structure

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Related Domains

Browse other domains in NMT1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyNMT1(7523.1.1.19)

Ligands

in contact, ≤ 4 Å

2-(2-METHOXYETHOXY)ETHANOLPG0
Magnesium ionMG
metalwithin 5 Å only

+ 2 additives (Heptaethylene glycol, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL)

Heptaethylene glycol

Pfam Families

NMT1/THI5 like

ClanCL0177PBP

External Links

ECOD PDB View: 4KR5 RCSB PDB: 4KR5 PDBe: 4KR5 UniProt: Q9CES5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03394

2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOLPE4

Shown in the structure viewer. Drug annotations from DrugDomain.