ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4n6dA1 - ECOD Domain | ECOD

ECOD/Domains/e4n6dA1

e4n6dA1

UID: 001521774

PDB

Range: A:28-147,A:235-339
PDB: 4N6D chain A(all domains)
UniProt: C6C297 (all domains)
Gene: Desal_3247

Molecule: TRAP dicarboxylate transporter-DctP subunit

3D Structure

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Related Domains

Browse other domains in DctP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyDctP(7523.1.1.16)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acidI3C

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Pfam Families

Bacterial extracellular solute-binding protein, family 7

ClanCL0177PBP

External Links

ECOD PDB View: 4N6D RCSB PDB: 4N6D PDBe: 4N6D UniProt: C6C297

Downloads

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