ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4nq8B2 - ECOD Domain | ECOD

ECOD/Domains/e4nq8B2

e4nq8B2

UID: 001521860

PDB

Range: B:25-145,B:236-324
PDB: 4NQ8 chain B(all domains)
UniProt: Q7WGZ0 (all domains)

Molecule: Putative periplasmic substrate-binding transport protein

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyDctP(7523.1.1.16)

Ligands

in contact, ≤ 4 Å

2,4-Dihydroxy-3,3-Dimethyl-ButyratePAF
drugDrugBank DB01930
Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Bacterial extracellular solute-binding protein, family 7

ClanCL0177PBP

External Links

ECOD PDB View: 4NQ8 RCSB PDB: 4NQ8 PDBe: 4NQ8 UniProt: Q7WGZ0

Downloads

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