ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2q88A2 - ECOD Domain | ECOD

ECOD/Domains/e2q88A2

e2q88A2

UID: 001522245

PDB

Range: A:0-98,A:200-256
PDB: 2Q88 chain A(all domains)
UniProt: Q92WC8 (all domains)
Gene: ehuB

Molecule: Putative ABC transporter amino acid-binding protein

3D Structure

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Related Domains

Browse other domains in SBP_bac_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_3(7523.1.1.4)

Ligands

in contact, ≤ 4 Å

Ectoine4CS
drugDrugBank DB19171
Cadmium ionCD
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00497SBP_bac_3

Bacterial extracellular solute-binding proteins, family 3

ClanCL0177PBP

External Links

ECOD PDB View: 2Q88 RCSB PDB: 2Q88 PDBe: 2Q88 UniProt: Q92WC8

Downloads

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