ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vfeA2 - ECOD Domain | ECOD

ECOD/Domains/e1vfeA2

e1vfeA2

UID: 001522987

PDB

Range: A:5-90,A:252-325
PDB: 1VFE chain A(all domains)
UniProt: P02788 (all domains)
Gene: LTF

Molecule: HUMAN LACTOFERRIN

3D Structure

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Related Domains

Browse other domains in Transferrin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyTransferrin(7523.1.1.2)

Ligands

in contact, ≤ 4 Å

FE (III) IONFE
metal

+ 1 additive (Carbonate ion)

Carbonate ionCO3
DrugBank DB14531

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00405Transferrin

Transferrin

ClanCL0177PBP

External Links

ECOD PDB View: 1VFE RCSB PDB: 1VFE PDBe: 1VFE UniProt: P02788

Downloads

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