ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1xt8B2 - ECOD Domain | ECOD

ECOD/Domains/e1xt8B2

e1xt8B2

UID: 001523137

PDB

Range: B:7-108,B:203-257
PDB: 1XT8 chain B(all domains)
UniProt: Q0P9S0 (all domains)
Gene: cjaA

Molecule: putative amino-acid transporter periplasmic solute-binding protein

3D Structure

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Related Domains

Browse other domains in SBP_bac_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_3(7523.1.1.4)

Ligands

in contact, ≤ 4 Å

CysteineCYS
drugDrugBank DB00151

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF00497SBP_bac_3

Bacterial extracellular solute-binding proteins, family 3

ClanCL0177PBP

External Links

ECOD PDB View: 1XT8 RCSB PDB: 1XT8 PDBe: 1XT8 UniProt: Q0P9S0

Downloads

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Drug annotations from DrugDomain.