ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2z8dB1 - ECOD Domain | ECOD

ECOD/Domains/e2z8dB1

e2z8dB1

UID: 001523346

PDB

Range: B:36-155,B:315-437
PDB: 2Z8D chain B(all domains)
UniProt: A8W790 (all domains)
Gene: gltA

Molecule: Galacto-N-biose/lacto-N-biose I transporter substrate-binding protein

3D Structure

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Related Domains

Browse other domains in SBP_bac_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_1(7523.1.1.8)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (2-(N-morpholino)ethanesulfonic acid)

2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01547SBP_bac_1

Bacterial extracellular solute-binding protein

ClanCL0177PBP

External Links

ECOD PDB View: 2Z8D RCSB PDB: 2Z8D PDBe: 2Z8D UniProt: A8W790

Downloads

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