ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4pafA1 - ECOD Domain | ECOD

ECOD/Domains/e4pafA1

e4pafA1

UID: 001523490

PDB

Range: A:148-236
PDB: 4PAF chain A(all domains)
UniProt: Q5LSJ5 (all domains)
Gene: dctP

Molecule: TRAP dicarboxylate transporter, DctP subunit, putative

3D Structure

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Related Domains

Browse other domains in DctP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyDctP(7523.1.1.16)

Ligands

in contact, ≤ 4 Å

3,4-Dihydroxybenzoic AcidDHB
drugDrugBank DB03946

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Bacterial extracellular solute-binding protein, family 7

ClanCL0177PBP

External Links

ECOD PDB View: 4PAF RCSB PDB: 4PAF PDBe: 4PAF UniProt: Q5LSJ5

Downloads

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