ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qseB1 - ECOD Domain | ECOD

ECOD/Domains/e4qseB1

e4qseB1

UID: 001523651

PDB

Range: B:28-142,B:297-409
PDB: 4QSE chain B(all domains)
UniProt: A9CGI0 (all domains)
Gene: Atu4361

Molecule: ABC-TYPE SUGAR TRANSPORTER

3D Structure

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Related Domains

Browse other domains in SBP_bac_8 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_8(7523.1.1.28)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13416SBP_bac_8

Bacterial extracellular solute-binding protein

ClanCL0177PBP

External Links

ECOD PDB View: 4QSE RCSB PDB: 4QSE PDBe: 4QSE UniProt: A9CGI0

Downloads

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