ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rpoB1 - ECOD Domain | ECOD

ECOD/Domains/e4rpoB1

e4rpoB1

UID: 001524118

PDB

Range: B:89-168,B:274-307
PDB: 4RPO chain B(all domains)
UniProt: P52679 (all domains)
Gene: pcpR

Molecule: PCP degradation transcriptional activation protein

3D Structure

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Related Domains

Browse other domains in LysR_substrate →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyLysR_substrate(7523.1.1.15)

Ligands

in contact, ≤ 4 Å

2,4,6-trichlorophenolT6C

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03466LysR_substrate

LysR substrate binding domain

ClanCL0177PBP

External Links

ECOD PDB View: 4RPO RCSB PDB: 4RPO PDBe: 4RPO UniProt: P52679

Downloads

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