ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1dotA2 - ECOD Domain | ECOD

ECOD/Domains/e1dotA2

e1dotA2

UID: 001524673

PDB

Range: A:431-590
PDB: 1DOT chain A(all domains)
UniProt: P56410 (all domains)

Molecule: DUCK OVOTRANSFERRIN

3D Structure

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Related Domains

Browse other domains in Transferrin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyTransferrin(7523.1.1.2)

Ligands

in contact, ≤ 4 Å

FE (III) IONFE
metal
2-acetamido-2-deoxy-beta-D-glucopyranoseNAG

+ 1 additive (Carbonate ion)

Carbonate ionCO3

Pfam Families

PF00405Transferrin

Transferrin

ClanCL0177PBP

External Links

ECOD PDB View: 1DOT RCSB PDB: 1DOT PDBe: 1DOT UniProt: P56410

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14531

Shown in the structure viewer. Drug annotations from DrugDomain.